Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIITSILLLSCIFFMPTISAESFNASAKYALAVDLDSGKILYEKDANRPAAIASLTKIMTVYMVYKEIDNGNLKWNTKVNISDYPYQLTRESDASNVPLEKR-RYTVKQLVDAAMISSANSAAIALAEHIS-GT-----ESKFVDKMTAQLEKWGIHDSHLVNASGLNNSMLGNHIYPKSSQNDENKMSARDIAIVAYHLVNEYPSILKITSKSVAKFDK----------DIMHSYNYMLPDMPVFRPGITGLKTGTTELAGQSFIATSTESGMRLLTVIMHADKADKDKYARFTATNSLLNYITNTYEPNLVLAKGATYKGKEASVRDGKEQSVIAVAKNDLKVAQKKNITKQNQLKINFKKELTAPITKKENLGKAYYVDLNKVGKGYLIKEPSVHLVAKDSIERSFFLKVWWNHFVRYVNEKL |
1ES5 Chain:A ((3-261)) | -----------------------KPTIAAVGGYAMNNGTGTTLYTKAADTRRSTGSTTKIMTAKVVLA---QSNLNLDAKVTIQKAYSDYVVANNASQAHLIVGDKVTVRQLLYGLMLPSGCDAAYALADKYGSGSTRAARVKSFIGKMNTAATNLGLHNTHFDSFDGIGN--------------GANYSTPRDLTKIASSAMKN-STFRTVVKTKAYTAKTVTKTGSIRTMDTWKNTNGLLSS----YSGAIGVKTGAGPEAKYCLVFAATRGGKTVIGTVLASTSI----PARESDATKIMNYGFAL----------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ES5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -127089 for 2231 contacts (-57.0/contact) +
2D Compatibility (PS) -25922 + (NN) -5710 + (LL) 12248
1D Compatibility (HY) -7600 + (ID) 3050
Total energy: -157123.0 ( -70.43 by residue)
QMean score : 0.541
|
|
|