Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKYILKRVAIL----LVTLWVVIT-LSFFLMQILPGTPYNNPKLTEEM-IALLNKQYGLDKPVWQQYLTYLWNVLHGDFGTSYQSVNQPVSRMISLRLGVSVHLGVQALVFGVLGGILVGAISARHKNDKVDGILSVIATLGISMPSFIIGILLLDYFGFKWNLLPL--SGWGTFSQTILPSLALGLPTLASVSRFFRSEMIETLNSDYVQLARSKGMTIRQVTRKHAYRNSMIPILTLIGPLAAGLLTGSALIEQIFSIPGIGQQFVTSIPTKDYPVIMG-TTIVYAVML-MVAILITDVVISIVDPRVRLQ----- |
4RWR Chain:A ((55-323)) | VYREKQKKVESLPMEEYVTGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNNADVTDTDQVYKS--KEELKKQWGNNYENNLKKIEEAVSKTAG-------QVLTYE---GKPISASFFSTSNGRTENAA--------------------DYWGNDYPYLKSVDSPWDQAS-----------PKFTSEQIFTVADFQKRLGVKV--LADGKVGDIKGRTEGKRVKDVAFQGKTLTGRDVRDKLE---LRSSDFTWKQEGDKIV--VTTKGFGHGVGMS--QYGANGMAAEGKKYTDIVAHYYKGVEIKTMNDY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145500 for 1961 contacts (-74.2/contact) +
2D Compatibility (PS) -25196 + (NN) 7286 + (LL) 4364
1D Compatibility (HY) 3200 + (ID) 2500
Total energy: -158346.0 ( -80.75 by residue)
QMean score : 0.110
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