Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIFEKAPAKLNLGLDIKGRCDDGYHELAMIMVSID-LNDYVTISELKEDCIVIDSDSSKMP-LNNDNDVFKAADIIKNQYGINKGVHIRLEKSIPVCAGLGGGSTDAAATIRALNRLWNLQMDYDEMVAIGFKIG---------SDVPYCLGGGCSLVLGKGE-IVKPLPTLRPCWIVLVKPDFGISTKSIFRDIDCKSISRV------DIDLLKSAILSSDYQLMVKSMGN--S-LEDITITKNPVISTIKERMLNSGADVALMTGSGPTVFSMCSTEKKADRVFNSMKGFCKEVYKVRLLR |
| 1H72 Chain:C ((1-286)) | MKVRVKAPCTSANL----GVGFD------VFGLCLKEPYDVIEVEAIDDKEIIIEVDDKNIPTDPDKNVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNYEPLEVLHIPIDFKLDILIAIPNISINTKEAREILPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGK-LIPNYFKIKEEVKD-KVYGITISGSGPSIIAFPKEE-FIDEVENILRDYYENTIRTEVGK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162840 for 2307 contacts (-70.6/contact) +
2D Compatibility (PS) -28846 + (NN) -11624 + (LL) 844
1D Compatibility (HY) -7600 + (ID) 2850
Total energy: -212916.0 ( -92.29 by residue)
QMean score : 0.500
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