Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKELVKFIYSSSEGQLKALQSKANALTGEVTI---SDDVSDIADAWKKRLGLKTVQTALARKLAYASARHHYK---------------DGKTMLEDISA--GKTRRHANSYI
2KPO Chain:A ((1-110))
--MLLYVLIISNDKKLIEEARKMAEKANLELRTVKTEDELKKYLEEFRKESQNIKVLILVSNDEELDKAKELAQKMEIDVRTRKVTSPDEAKRWIKEFSEEGGSLEHHHHHH-
General information:
TITO was launched using:
RESULT:
Template:
2KPO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7593 for 573 contacts (-13.3/contact) +
2D Compatibility (PS) -9865 + (NN) -3273 + (LL) 544
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -24037.0 ( -41.95 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_2KPO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KPO-query.scw
PDB file :
Tito_Scwrl_2KPO.pdb
: