Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNCIFCKIISGEIPSSKVYEDDEVLAFLDITQTTTGHTLLIPKKHVRNVLEMDEKTAQITFERLPKVARAV--QAATKAKGMNIINNNEEIAGQTVFHAHVHLVPRFDESDGIKIHYTTHEPDFEALAKLAKEIRKEIQL
1XQU Chain:B ((34-141))
LENCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILID-IHKAANKVAEDLGIAEKGYRLITNCGVAAGQTVFHLHYHLLGGVDMGPKIL--------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61144 for 739 contacts (-82.7/contact) +
2D Compatibility (PS) -10930 + (NN) 241 + (LL) 2028
1D Compatibility (HY) -11600 + (ID) 2350
Total energy: -83755.0 ( -113.34 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_1XQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XQU-query.scw
PDB file :
Tito_Scwrl_1XQU.pdb
: