Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKDRQIQKTKVAIYNAFISLLQENDYSKITVQDVIGLANVGRSTFYSHYESKEVLLKELCEDLFHHLFKQGRD---VTFEEYLVH----ILKHFEQNQDSIATLLLSD----DPYFLLRFRSELEHDVYPRLREEYITKVDIPEDFLKQFLLSSFIETLKWWLHQRQKMTVEDLLKYYLTMVER
3FRQ Chain:A ((6-178))
------KLKSDDEVLEAATVVLKRCGPIEFTLSGVAKEVGLSRAALIQRFTNRDTLLVRMMERGVEQVRHYLNAIPIGAGPQGLWEFLQVLVRSMNTRNDFSVNYLISWYELQVPELRTLAIQ-RNRAVVEGIRKRL---PPGAPAAAELLLHSVIAGATMQWAVDPDGELADHVLAQIAAILCL
General information:
TITO was launched using:
RESULT:
Template:
3FRQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102659 for 1096 contacts (-93.7/contact) +
2D Compatibility (PS) -17270 + (NN) -11460 + (LL) 1032
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -134157.0 ( -122.41 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_3FRQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FRQ-query.scw
PDB file :
Tito_Scwrl_3FRQ.pdb
: