Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSKKLLFSAAVLTMVAGSTVEPVAQFATGMSIVRAAEVSQERPAKTTVNIYKLQADSYKSEITSNGGIENKDGEVISNYAKLGDNVKGLQGVQFKRYKVKTDISV-DELKK-LTTVEAADAKVGTILEE-GVSLPQKTNAQGLVVDA-LDSKSNVRYLYVEDLKNSPSNITKAYAVPFVLELPVANSTGTGFLSEINIYPKNVVTDEPKTDKDVKKLGQDDAGYTIGEEFKWFLKSTIPANLG--DYEKFEITDKFADGLTYKS-V-GKIKIGSKTLNRDEHYTIDEPTVDNQNTLKITFKPEKFKEIAELLKGMTLVKNQDALDKATANTDDAAFLEIPVASTINEKAVLGKAIENTFELQYDHTPDKADNP------KPSNPPRKPEVHTGGKRFVKKDSTE-TQTLGGAEFDLLASDGTAVKWTDALIKANTNKNYIAGEAVTGQPIKLKSHTDGTFEIKGLAYAVDANA----------EGTAVTYKLKETKAPEGYVIPDKEIEFTVSQTSYNTKPTDITVDSADATPDTIKNNKRPSIPNTGGIGTAIFVAIGAAVMAFAVKGMKRRTKDN |
| 3HR6 Chain:A ((4-418)) | ----------------------------------------------RTSIAVHALMGLPT---------G----------------GLPKVDGMSFTLYRVNEIDLTTQAGWDAASKIKLEELYTNGHPTDKVTKVATKKTEGGVAKFDNLT---PALYLVVQE--LNGAEAV-VRSQPFLVAAPQTNPTGDGWLQDVHVYPKHQALS--EPVKTAVDPDATQPGFSVGENVKYRVATKIPEIASNTKFEGFTVADKLPAELGKPDTNKITVTLGGKPI-NSTDVSVQTYQVGDRTVLSVQLAGATLQSLDQ-------------------HKDQE--LVVEFEAPVTKQPENG-QLDNQAWVLPSNPTAQWDPEESGDAALRGMPSSRVSSKFGQITIEKSFDGNTPGADRTATFQLHRCEADGS-LVKS----DPPISLD-------GKQEFVTGQDGKAVLSGIHLGTLQLESNVMKYTDAWAGKGTEFCLVETATASGYELLPKPVIVKLEANESTNVLVEQKVKIDNKK--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HR6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 64096 for 2894 contacts (22.1/contact) +
2D Compatibility (PS) -39054 + (NN) 5058 + (LL) 9292
1D Compatibility (HY) -10800 + (ID) 3000
Total energy: 25592.0 ( 8.84 by residue)
QMean score : 0.253
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