Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------MKRLHKLFITVIATLGMLGVMTFGLPTQPQNVTPIVHADVNSSVDTSQEFQNNLKNAIGNLPFQYVNGIYELNNNQTNLNADVNVKAYVQNTIDNQQRPSTANAMLDRTIRQYQNRRDTTLPDANWK------PLGWHQVAT----NDHYGHAVDKGHLIAYALAGNFKGWDASVSNPQNVVTQTAHSNQSNQKINRGQNYYESLVRKAVDQNKRVRYRVTPLYR---NDTDLVPFAMHLEAKSQDGTLEFNVAIPNTQASYTMDYATGEITLN--------------------------- |
| 1YT3 Chain:A ((1-375)) | MNYQMITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFC--GRP-MSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVW------------YLLPITAKLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQTLPEDALPQPMLNLMDMPGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1YT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -11388 for 1560 contacts (-7.3/contact) +
2D Compatibility (PS) -25095 + (NN) -847 + (LL) 620
1D Compatibility (HY) -3200 + (ID) 1400
Total energy: -41310.0 ( -26.48 by residue)
QMean score : 0.059
|
|
|