Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIQAAGIEFDLAFTSVLKRAIKTTNLALEAADQLWVPVEKSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPDMAKDDEHSAHTDRRYASLDDSVIPDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKQLSDDEIMDVEIPNFPPLVFEFDEKLNLVSEYYLGK
4ODI Chain:D ((21-245))
---LVLIRHGESTWNKENRFTGWTDVPLSPVGEQEAVEAAKALKEKGFEFDVAYTSVLQRAVVTCWTVLKGTDMCHIPVKSSWRLNERHYGALQGLNKAETAAKHGDEQVKIWRRSYDIPPPPLEKSDKRWPGNDAVYKMVPNEALPLTECLKDTVERVLPFWFDHIAPSIMEGKRVLVAAHGNSLRGLVKHLDKMSDEAVLELNIPTGVPLVYELDEDLQPVRHYYLLD
General information:
TITO was launched using:
RESULT:
Template:
4ODI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69810 for 1860 contacts (-37.5/contact) +
2D Compatibility (PS) -23911 + (NN) -1759 + (LL) 464
1D Compatibility (HY) -20800 + (ID) 5950
Total energy: -121766.0 ( -65.47 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_4ODI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ODI-query.scw
PDB file :
Tito_Scwrl_4ODI.pdb
: