Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDTLKLYFVCGTVDCSRKNILTVVEEALQAGITLFQFREKGFTALQGKEKIAMAKQLQILCKQYQVPFIIDDDIDLVELIDADGLHIGQNDLPVDEARRRLPDKIIGLSVSTMAEYQKSQLSVVDYIGIGPFNPTQSKADAKPAVGNRTTKAVREINQDIPIVAIGGITSDFVHDIIESGADGIAVISAISKANHIVDATRQLRYEVEKALVNRQKRSDVIK
1XI3 Chain:B ((11-214))
LRNKLKLYVIT---DRRLKPEVESVREALEGGATAIQMRIKNAPT---REMYEIGKTLRQLTREYDALFFVDDRVDVALAVDADGVQLGPEDMPIEVAKEIAPNLIIGASVYSLEEALEAEKKGADYLGAGSVFPT----DAR-VIGLEGLRKIVE-SVKIPVVAIGGINKDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVEEVLG----------
General information:
TITO was launched using:
RESULT:
Template:
1XI3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -167046 for 1770 contacts (-94.4/contact) +
2D Compatibility (PS) -22552 + (NN) -14912 + (LL) 1348
1D Compatibility (HY) -10800 + (ID) 3750
Total energy: -217712.0 ( -123.00 by residue)
QMean score : 0.693
(partial model without unconserved sides chains):
PDB file :
Tito_1XI3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XI3-query.scw
PDB file :
Tito_Scwrl_1XI3.pdb
: