Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIMFVAAEGAPFAKTGGLGDVIGALPKSLSKKGHDVVVVMPYYDMVDQKFGDQIENLMYFYTDVGWRHQYVGVKRLSQDNVTFYFIDNQYYFYR-GHVY------GDWDDGERFAYFQ----LAALELMEKINFIPDVLHVHDYHTAMIPFLLKEKYHWIQAYNNIRTVFTIHNIEFQGQFGPEMLGDLFGVGAERYEDGTLRWNNCLNWMKAAILYSDRVTTVSPSYANEIKTPEFGKGLDQIMRMEAGK---LSGIVNGIDSDLLNPETDAFLPYHFSKSNLEGKIKNKLALQENLGLPQDKNVPLIGIVSRLTDQKGFDIIASELDNMLQQDIQMVILGTGYHHFEETFSYFASRYPEKLSANITFDLRLAQQIYA-ASDIFMMPSAFEPCGLSQMMAMRYGSLPLVHEVGGLKDTVVAF---------NQFDGSGTGFSFNHFSGYWLMQTLKLALEVYNDYPEAWKKLQWQAMSKDFSWDTACVAYEQLYQQLQ |
| 1RZU Chain:A ((1-475)) | MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKC-FEFTDLLG---EKADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLP--GWRPDMVHAHDWQAAMTPVYMRYAE-----TPEIPSLLTIHNIAFQGQFGANIFSK-LALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGV---IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD-DGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYN-EPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAA------TGVQFSPVTLDGLKQAIRRTVRYY-HDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RZU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -305084 for 4072 contacts (-74.9/contact) +
2D Compatibility (PS) -49922 + (NN) -27711 + (LL) 1928
1D Compatibility (HY) -35200 + (ID) 7550
Total energy: -423539.0 ( -104.01 by residue)
QMean score : 0.570
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