Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNKKKLHGFFNFVRWLLVVLLIIVGLALVFNKPIRNAFIAHQSNHYQISRVSKKTIEKNKKSKTSYDFSSVKSISTESILSAQTKSHNLPVIGGIAIPDVEINLPIFKGLGNTELSYGAGTMKENQIMGGQNNYALASHHVFGLTGSSKMLFSPLEHAKKGMKVYLTDKSKVYTYTITEISKVTPEHVEVIDDTPGKSQLTLVTCTDPEATERIIVHAELEKTGEFSTADESILKAFSKKYNQINL
3RCC Chain:K ((10-147))
---------------------------------------------------------------------------------------HNLPVIGGIAIPDVEINLPIFKGLGNTELSYGAGTMKENQIMGGPNNYALASHHVF--------LFSPLEHAKKGMKVYLTD-SKVYTYTITEISKVTPEHVEVIDDTPGKSQLTLVTCTDPEATERIIVHAELEKTG----------------------
General information:
TITO was launched using:
RESULT:
Template:
3RCC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81212 for 932 contacts (-87.1/contact) +
2D Compatibility (PS) -13768 + (NN) -3856 + (LL) 8820
1D Compatibility (HY) -17600 + (ID) 6400
Total energy: -114016.0 ( -122.33 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_3RCC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RCC-query.scw
PDB file :
Tito_Scwrl_3RCC.pdb
: