Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEYNWDERHIITFPEENSALTTKDLHVY---YGEKEAIKGIDMQFEKNKITALIGPSGCGKSTYLRSLNRMNDTIDIARVTGQIMYEGIDVNAQDINVYEMRKHIGMVFQRPNPFAK-SIYKNITFAYERAGVKDKKFLDEVVETSLKQAALWDQV--KDDLHKSAFTLSGGQQQRLCIARAIAVKPEILLMDEPASALDPIATMQLEETMFEL-KKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTNNIFQNAKCQSTSDYVSGRFG |
| 2OLK Chain:B ((22-263)) | --------------------LQMIDVHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDE-----GEIIIDGINLKAKDTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAP----MKVRKWPREKAEA--KAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKVF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OLK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116403 for 1882 contacts (-61.9/contact) +
2D Compatibility (PS) -25217 + (NN) -9642 + (LL) 2336
1D Compatibility (HY) -17600 + (ID) 4700
Total energy: -171226.0 ( -90.98 by residue)
QMean score : 0.466
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