Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHSSWHDLIKRELPN-HYYNKINTFMDAVYESGIVYPPRDKVFNAIQITPLENVKVVIIGQDPYHGPQQAQGLSFSVPDNLPAPPSLQNILKELAEDIGSRS---HHDLTSWAQQGVLLLNACLTVPEHQANGHAGLIWEPFTDAVIKVVNQKETPVVFILWGGYARKKKSLIDNPIHHIIESPHPSPLSAYRGFFGSRPFSRTNHFLEEEGINEIDWLN
1FLZ Chain:A ((5-220))
----TWHDVLAEEKQQPHFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQHGETPIDWMP
General information:
TITO was launched using:
RESULT:
Template:
1FLZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109064 for 1745 contacts (-62.5/contact) +
2D Compatibility (PS) -22314 + (NN) -10149 + (LL) 288
1D Compatibility (HY) -21600 + (ID) 5400
Total energy: -168239.0 ( -96.41 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_1FLZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FLZ-query.scw
PDB file :
Tito_Scwrl_1FLZ.pdb
: