Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDYIDLALTYGGFTSLDKVYLEKKLDGLSKQQRLDFITPPPSVINAYFAEIYQKQGPEAATDYYFDLSKALGLFPKHLSFDEEKPFIRLNLSGKSFGFAYLNDQEEASVFSEVKEVITPQLLLEIAQIFPQYKVYQDRSGIRMAKIDFDETESQNITPETSLLGNVLQLKKDIIKITSFNQEELLELVKTKSGKYYYSSQGRESVIYIDTKSTN |
4G6V Chain:B ((2-104)) | ------------------------------AIDLFCYLSIDRGAAESDLNKIRSNHSELFEGKFLISP-------VRDADFSLKEIAAEHGLVAESFFLVSLNDKNSADLIPIVSKILVDGFNGGAILILQDNEYRRTSL--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14219 for 763 contacts (-18.6/contact) +
2D Compatibility (PS) -10710 + (NN) -1994 + (LL) 7464
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -22809.0 ( -29.89 by residue)
QMean score : 0.206
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