Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MT--------------DLEKIIKAIKSDSQNQNYTENGIDPLFAAPKTARINIVGQAPGLKTQEARLYW----KDKSGDRLRQWLGVDEETFYHSGKFAVLPLDFYYPGKGKSGDLPPR-----------------------------------------------KGFAEKWHPLILKEMPNVQLTLLVGQYAQKYYLGSSAHKNLTETVKSYKDYLPDYLPLVHPSPRNQIWLKKNPWFEKDLIVDLQKIVADILKD-- |
| 2OCC Chain:C ((1-261)) | MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAGAWYWHFVDVVWLFLYVSIYWWGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 33359 for 1188 contacts (28.1/contact) +
2D Compatibility (PS) -20131 + (NN) -4336 + (LL) 0
1D Compatibility (HY) -9200 + (ID) 1450
Total energy: -1758.0 ( -1.48 by residue)
QMean score : 0.020
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