Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKILVFGHQNPDSDAIGSSVAFAYLAKEAWGLDTEAVALGTPNEETAYVLDYFGVQAPRVVESAKAEGVETVILTDHNEFQQSISDIKDVTVYGVVDHHRVANFETANPLYMRLEPVGSASSIVYRMFKENGVSV--------PKELAGLLLSGLISDTLLLKSPTTHASDIPVAKELAEIAGV-NLEEYGLEMLKAGTNLSSKTAAELIDIDAKTFELNGEAVRVAQVNTVDINDILARQEEIEVAIQEAIVTEGYSDFVLMITDIVNSNSEILALGSNMAKVEAAFEFTLENNHAFLAGAVSRKKQVVPQLTESYNA |
2EB0 Chain:B ((4-307)) | -----VVGHKNPDTDSIASAIVLAYF------LDCYPARLGDINPETEFVLRKFGVMEPELIESAKGK---EIILVDHSEKSQSFDDLEEGKLIAIIDHHKVG-LTTTEPILYYAKPVGSTATVIAELYFKDAIDLIGGKKKELKPDLAGLLLSAIISDTVLFKSPTTTDLDKEMAKKLAEIAGISNIEEFGMEILKAKSVVGKLKPEEIINMDFKNFDFNGKKVGIGQVEVIDVSEVESKKEDIYKLLEEKLKNEGYDLIVFLITDIMKEGSEALVVG-NKEMFEKAFNVKVEGNSVFLEGVMSRKKQVVPPLERAYNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140593 for 2609 contacts (-53.9/contact) +
2D Compatibility (PS) -31400 + (NN) -4216 + (LL) 1080
1D Compatibility (HY) -31600 + (ID) 6300
Total energy: -213029.0 ( -81.65 by residue)
QMean score : 0.504
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