Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDYINRILHFIKEHMTYHVNFIDDFLDIKWEKVSNIHLRFWTTIIAYLVIFILSISTVILNLVLLFQGFLTQNPIIYLLFFITLVCAFYFAYKFITYTPTIVKNALQYIKKLKNV
2JQ3 Chain:A ((1-79))
SEAEDASLLSFMQGYMKHATKTAKDALSSVQESQVAQQARGWVTD------GFSSLKDYWSTVKDKFSEFWDLDP---------------------EVRPTSAVAA----------
General information:
TITO was launched using:
RESULT:
Template:
2JQ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17207 for 333 contacts (-51.7/contact) +
2D Compatibility (PS) -7628 + (NN) 50 + (LL) 5016
1D Compatibility (HY) 2800 + (ID) 800
Total energy: -17769.0 ( -53.36 by residue)
QMean score : 0.101
(partial model without unconserved sides chains):
PDB file :
Tito_2JQ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JQ3-query.scw
PDB file :
Tito_Scwrl_2JQ3.pdb
: