Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVRLAFPNEIDQIMLLIEEARAEIAKTG-----SDQWQKEDGYPNRNDIIDDIL--NGYAWVGIEDGMLATYAAVIDGHEEVYDAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIE---GHKGPDFRCDTHEKNVTMQHILNKLGYQYCGKVPLDGVRLAYQKIKEKGETSIYREIDERNPM
1TIQ Chain:A ((3-156))
VKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYL--ESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNIDDAQS---------EEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGAHSFYMGDEEQTDLIMAKTLILE---------
General information:
TITO was launched using:
RESULT:
Template:
1TIQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75320 for 971 contacts (-77.6/contact) +
2D Compatibility (PS) -15634 + (NN) -5573 + (LL) 1696
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: -99681.0 ( -102.66 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_1TIQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TIQ-query.scw
PDB file :
Tito_Scwrl_1TIQ.pdb
: