Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTMLKVENLSIHYG-----VIQAVNDVSFEVNQGEVVTLIGANGTGKTSILRTISGLVRPSQGSISFMG-----KPIHKLAARKIVGNGLAQVPEGRHVFSSLSVMENLEMG-AFLQKDREQNQKMLKKVFDRFPRLEERKNQDAATLSGGEQQMLAMGRALMSRPKLLLLDEPSMGLAPIFIQEIFNIIEDIK-KQGTTVLLVEQNANKALTIADKAYVLETGKVVLSGTGKELLVSDQVRKAYLGG |
| 4MKI Chain:A ((7-236)) | ---IKVENVSFIYNEGTPYATVALKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSLKDIRKQVGL-VFQYPE-YQLFEE-TVFKDIAFGPSNLGLSEEEVKERVYEAMEIVGISKELADKSPFELSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILNKIKEIHDKYKMITILVSHNMEDIARIADKIIVMNRGKIELIGTPREVFREAERLEKIGLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87866 for 1715 contacts (-51.2/contact) +
2D Compatibility (PS) -23548 + (NN) -7392 + (LL) 300
1D Compatibility (HY) -15600 + (ID) 3750
Total energy: -137856.0 ( -80.38 by residue)
QMean score : 0.551
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