Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALELLTPFTKVELEEKKRDTNRKQIGIMGGNFNPVHNAHLVVADQVRQQLCLDQVLLMPEFQPPHIDKKETIDEQHRLKMLELAIEGIDGLSIEPIEIERKGISYTYDTMKLLIEKNPDVDYYFIIGADMVEYLPKWHRIDELVKMVQFVGVQRPKYKAGTSYPVIWVDLPLMDISSSMIRQFIKSNRQPNYLLPKEVLDYIRKEGLYK
3DV2 Chain:B ((2-188))
-----------------------RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYE
General information:
TITO was launched using:
RESULT:
Template:
3DV2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158498 for 1425 contacts (-111.2/contact) +
2D Compatibility (PS) -20730 + (NN) -15974 + (LL) 2048
1D Compatibility (HY) -17600 + (ID) 4450
Total energy: -215204.0 ( -151.02 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_3DV2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DV2-query.scw
PDB file :
Tito_Scwrl_3DV2.pdb
: