Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKRLPNLQVALDHSDLQGAIKAAVSVGHEVDVIEAGTVCLLQVGSELVEVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICCATIPTMEAALKAIKEERGDRGEIQIELYGDWTYEQAQQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIDMGFRVSVTGGLSTDTLQLFEGVDVFTFIAGRGITEADDPAAAARAFKDEIKRIWG
1Q6L Chain:B ((3-216))
----LPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGD---VQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAELWG
General information:
TITO was launched using:
RESULT:
Template:
1Q6L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147978 for 1834 contacts (-80.7/contact) +
2D Compatibility (PS) -23278 + (NN) -8756 + (LL) 456
1D Compatibility (HY) -19200 + (ID) 5400
Total energy: -204156.0 ( -111.32 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_1Q6L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q6L-query.scw
PDB file :
Tito_Scwrl_1Q6L.pdb
: