Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKEYENNPYHLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLRIDDKTAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLD--TPEKEKRSHFFYENQGFKQITRDELDVDYIFPDRDSRIYVKLLD
1YX0 Chain:A ((1-151))
MHIKIDDLTGRQVVSLVNEHL------HSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKELDTRHGEIKSMRTSASHLRK--GVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQYCEPFA----DYGEDPNSVFMTKKL-
General information:
TITO was launched using:
RESULT:
Template:
1YX0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62282 for 992 contacts (-62.8/contact) +
2D Compatibility (PS) -15826 + (NN) -5206 + (LL) 688
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: -86726.0 ( -87.43 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_1YX0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YX0-query.scw
PDB file :
Tito_Scwrl_1YX0.pdb
: