Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSND----------------KELIRWDKDYAKIEGRVMKQNGAIPMQLVISKKGKKGKVN----HIE--------QQKLSQYVGALNTIMFAPEDLNLV-------KGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQRNHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELT------LKYHTALDVSDPLDLSKIGDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGR-----------DVQTYGSQGQQRTTALSLKLAEIDLIHEEI----GEYPILLLDDVLSELDDYRQSHLLHTIQGR-VQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK---------- |
3EUJ Chain:A ((3-483)) | MIARGKFRSLTLINWNGFFARTFDFDELVTTLSGGNGAGKSTTMAGFVTALIPDLTLLNFRNTTEAGSTSSSRDKGLYGKLKAGVCYAVLETVNSRAQRIITGVRLQQIAGRDKKVDIRPFSLQNVPMTDSVISLFTEQVANKARVLSLNDLKEKFEETAVTFKPYHSITDYHSFMFDLGILPKRLRSSSDRNKFYKLIEASLYGGISSVITK--SLRDYLLPENSGVRQAFQDAESVANILRKTIQREQNRILQLNQGLQNIAFGQVKGVRLVVNIRDTHSILLNALSDQSFSEALAMLYKRIGEELLDYRNYLDLEVETLRGAYGWMRAESSALSTGEAIGTGMSILLMVVQSWEEESRRMRAKDILPCRLLFLDQAARLDAMSINTLFELCERLDMQLLIAAP--ENISPERGTTYKLVRKILANQEYVHVVGLKGFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EUJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13642 for 2779 contacts (-4.9/contact) +
2D Compatibility (PS) -38582 + (NN) 986 + (LL) 316
1D Compatibility (HY) -1600 + (ID) 2450
Total energy: -54972.0 ( -19.78 by residue)
QMean score : 0.310
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