Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MTYHEWKDLALFYSVEST-QKFLEKVYIL-NGINDA------------KKNSFKNSERF----------IYFLKHAESFYKQAAYSPLEIKPILLF-YGMAQLIKACLITRDPHYP------SHTSVLAHGVTTRKRKKQNYCFSDDEVKIQRNGLCVH---FMKHLFGQSDIVDERYTMKKLLMAIPELSDIFYFQQKERFMTKVEKDKNEIFVPEEVVINYKMSDSRFAEYMSHHYQWSFTKKNEHGLLFEISPQDKEPWTST-----SLLFDMEKNQYYIPSQREQFL------RLPEMTIHYLILYNVGMI-------------ARY--------ETEWWYELLT---QHISD-DY-------------------VLIQQF-----------LLVSEKKFPKYASQFLLHF------------ |
| 4RU0 Chain:A ((30-444)) | GPDQQFFPLATYRVGAYASSGVQVWAGMIDYLNYINQVEGGINGVKLVWQECETEWTAEKGIECYERFKNGLDGAPVAVYQPNGAPAAYALSERAEVDKIPLITLGYGRTEATDGTVFP--YNFPVMLTFYSEASTLVNYIAQREG-------GFDRLKGKKIATLYHDSAYGRETLGPLKLLAEKYGFENIQIPVADPGN----EQSAQWRQIRQQNPDWVFLR-----TWGVSTPVAVKTAAR---FGFPVDHIIGDIWASSSEDVLPAGAAAKGYLALTPYPAGSDFEIHKRLKQYILDTGKSDLKDLKNFGSVYYNSGLVNAAVAVEAIRTAQGKFGKRPLNGEEGRWGLEHLNIDDARLKDMGYLGLMQNLKLSCRDHEGGGAARVQQWDGANWTLISEWIAADRALLRPLIDEKAAAFAKEKRLVPRTCN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RU0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67394 for 2240 contacts (-30.1/contact) +
2D Compatibility (PS) -29708 + (NN) 2948 + (LL) 2084
1D Compatibility (HY) -8000 + (ID) 2550
Total energy: -102620.0 ( -45.81 by residue)
QMean score : 0.108
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