Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDETVKLNHTCVICDQEKNRGIHLYTKF-----ICLDCERKVISTSTSDPDYAFYVKKLKSIHTPPLYS------------------
1HDM Chain:B ((3-87))--FVAHVESTCLLDDAGTPKDFTYCISFNKDLLTCWDPEENKMAPCNSLANVLSQHLNQKDTLMQRLNGLQNCATHTQPFWGSLTNR


General information:
TITO was launched using:
RESULT:

Template: 1HDM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12570 for 345 contacts (-36.4/contact) +
2D Compatibility (PS) -6433 + (NN) 266 + (LL) 132
1D Compatibility (HY) -800 + (ID) 500
Total energy: -19905.0 ( -57.70 by residue)
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_1HDM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HDM-query.scw
PDB file : Tito_Scwrl_1HDM.pdb: