Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILMDPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINEFAIGDMMPHVTVYFSIDPEEGLKRIYANGSREKNRLDLEKLDFHTKVQEGYQELMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKKIQL
2CCG Chain:B ((24-225))
----FITFEGPEGSGKTTVINEVYHRLVKD-YDVIMTREPGGVPTGEEIRKIVLEGND--MDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKN-S-----LDQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEKI--
General information:
TITO was launched using:
RESULT:
Template:
2CCG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146547 for 1780 contacts (-82.3/contact) +
2D Compatibility (PS) -21803 + (NN) -12315 + (LL) 804
1D Compatibility (HY) -20000 + (ID) 5350
Total energy: -205211.0 ( -115.29 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_2CCG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CCG-query.scw
PDB file :
Tito_Scwrl_2CCG.pdb
: