Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDDSIGVKRHWIWQGAFVLILAGVITKILSAVYRVPFQNIVGDVGFYIYQQVYPFLGIAVMLSTSGFPVII-SKLMNDYSEKNHHTILKISALFLSLIGILLFL---CLYLGAVPIALFMGDSHLAVLIQVAAYAFLLFPFVALLRGGFQGRHEMLPSALSQMTEQFLRVAVLLGLSFWLVKKGASLYTAGAAAASGSLAGSLVA--LIILGFFWFKTKRDNQTDRQNENVITTKELTKKLL--LYSVTICVSSLLLLFIQLVDALNLYALLSGGEASEEAKCLKGIYDRGQPLLQLGSVFAVSIATSLVPYISMAVKNKELKIMKEKITSSLKLCLVLGTGASAGLICILKPVNIMLFQNGEGTGALQV---FSCSILFASLAVTAAAVLQGAGYTVFPAIAVGAGVAVKWVLNTLLVPRYGIEGASLATAASFAAVAGLNLYQLRQKEWLDKLRGVLIPIIGSALLMSAVLLAYTRLWTFLFPATGRGAAVIESLSAVAIGGAVFIYCMMRLGIFTDEELNSVPFGSKLSKFMRRREQNGG |
| 1SQ9 Chain:A ((3-395)) | ----------------------KVFIATANA----------GKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKH------------------------SFWALKWGAS--------NSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNN---------------------------------GTVQISELSTLRPLYNFESQHNNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYET------EFGERIGSLSVPGEFAHSSWVMSLSFND-------------------------------------SGETLCSAGWDG--------KLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHG--------------DSLAEPGVFDVKFLKKGWRSGMGAD--LNESLCCVCLDRSIRWFREAG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -318860 for 3191 contacts (-99.9/contact) +
2D Compatibility (PS) -38604 + (NN) 15607 + (LL) 14172
1D Compatibility (HY) -4800 + (ID) 3800
Total energy: -336285.0 ( -105.39 by residue)
QMean score : 0.087
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