Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGKITVVGLGAGDMDQLTIGIHKLLTKADTLYVRTKDH-P-LIEELEKETKNIRFFDDIYEKHDQFEAVYEEIADILFEAA-RREDVVYAV-PGHPFVAEKTVQLLTERQEKENVQVKVAGGQSFLDATFNVLQIDPIEG-FQFVDAGT------LSADELELRHHLIICQVYDQMTASEVKLTLMEKLPDDYEVVIVTAAGSRGEEIRTVPLFELDRN---VALNNLTSVYIPPIKEEKLLYHEFSTFRSIIRELRGPNGCPWDKKQTHQSLKQYMIEECYELLEAIDEEDTDHMIEELGDVLLQVLLHAQIGEDEGYFTIDDVIKGISEKMVRRHPHVFKDVKVQDENDVLANWEDIKKAEKNTSESSLLDSVPKTLPALSKAAKLQKKAAKVGFDWEDVSDIWEKVSEEMKEFSSEVSEAPHEHNLKAEFGDILFALVNVARFYKIEPEEALTMTNDKFRRRFSYIEETAKEEGVELADMSLEDMDKLWNEAKETERRS |
3KWP Chain:A ((14-240)) | TGGHLYLVPTPIGNLDDMTFRAVKTLTAVDLIAAEDTRNTQKLLNHFEI-TTKQISFHE---------HNTQERIPQLIAKLKQGMQIAQVSDAGMPSISD-PGHELVNACIDAHIPVVPLPGANAGLTALIASGLAPQPFYFYGFLDRKPKDRKAEIAGLAQRPETLIFYEAPHRLK--KTLQNLAAGFGDERPAVLCRELTKRYEEFLRGSLAELANWAATDTVRGEFVVLVGGNPAP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KWP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120903 for 1642 contacts (-73.6/contact) +
2D Compatibility (PS) -23438 + (NN) -8900 + (LL) 21148
1D Compatibility (HY) 0 + (ID) 1750
Total energy: -133843.0 ( -81.51 by residue)
QMean score : 0.550
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