Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNGHLNQILLITDGCSNHGEDPLAMAAFAKEQGITVNVIGIMEENQIDPEAMKEVEGIALAGGGVHQVVYASQLSQTVQMVTKKAMTQTLQGVVNQELKQILGKNVEMEELSPEKRGEVMEVVDELGETVHLQVLVLVDTSASMAP-KLPTVKEALIDLSVSLNSRIGNNEFAMCIFPGKKQEVELVLNWTP-KLQSLSTLFAKLS-TGGITPTGPAIREATLQFEKI-----R--SRRGMLADDERRFDEFGM |
| 4OKU Chain:A ((43-194)) | ---------------------------------------------------------------------------------------------------------------------------------TNQLDICFLIDSSGSIGIQNFRLVKQFLHTFLMVLPIGPEEVNNAVVTYSTDVHLQWDLQSPNAVDKQLAAHAVLEMPYKKGSTNTADGLKACKQILFTGSRPGREHVPKLVIGMTDGESDS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39916 for 818 contacts (-48.8/contact) +
2D Compatibility (PS) -11353 + (NN) 2120 + (LL) 10032
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -41917.0 ( -51.24 by residue)
QMean score : 0.456
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