Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQQHDYVIGKNAVIETLKSDRKLYKLWMAENTVKGQAQQVI-ELAKKQGITIQYVPRKKLDQMVTG-QHQGVVAQVAAYEYAELDDLYKAAEEKNEQPFFLILDELEDPHNLGSIMRTADAVGAHGIVIPKRRAVGLTTTVAKASTGAIEHIPVARVTNLARTLEEMKERGIWVVGTDASAREDFRNMDGNMPLALVIGSEGKGMGRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRKRNPVGE
1IPA Chain:A ((25-263))-SQRRFLIEGAREIERALQAGIELEQALVWEGGLNPEEQQVYAAL-----LALLEVSEAVLKKLSVRDNPAGLIALARMP-ERTLEEYRP-----SPDALILVAVGLEKPGNLGAVLRSADAAGAEAVLVA-GGVDLYSPQVIRNSTGVVFSLRTLAA-SESEVLDWIKQHNLPLVATTPHAEALYWEANLRPPVAIAVGPEHEGLRAAWLEAAQTQVRIPMQGQADSLNVSVSAALLLYEALRQRLL---


General information:
TITO was launched using:
RESULT:

Template: 1IPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158809 for 1867 contacts (-85.1/contact) +
2D Compatibility (PS) -25156 + (NN) -5785 + (LL) 1332
1D Compatibility (HY) -12000 + (ID) 2900
Total energy: -203318.0 ( -108.90 by residue)
QMean score : 0.605

(partial model without unconserved sides chains):
PDB file : Tito_1IPA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1IPA-query.scw
PDB file : Tito_Scwrl_1IPA.pdb: