Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIPEKKSIAIMKELSIGNTKQMLMINGVD-VKNPLLLFLHGGPGTPQIGYVRHYQKELEQYFTVVHWDQRGSGLSYSKRISHHSMTINHFIKDTIQVTQWLLAHFSKSKLYLAGHSWGSILALHVLQQRPDLFYTYYGISQVVNPQDEESTAYQHIREISESKKASILSFLTRFIGAPPWKQDIQHLIYRFCVELTRGGFTHRHRQSLAVLFQMLTGNEYGVRNMHSFLNGLRFSKKHLTDELYRFNAFTSVPSIKVPCVFISGKHDLIVPAEISKQYYQELEAPEKRWFQFENSAHTPHIEEPSLFANTLSRHARHHL |
2XUA Chain:A ((5-264)) | -----------PYAAVNGTELHYRIDGERHGNAPWIVLSNSLGTDLSM-WAP-QVAALSKHFRVLRYDTRGHGHSEAPK---GPYTIEQLTGDVLGLMDTL----KIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWV-PRAVKA-------RTEGMHAL-ADAVL--------PRWFTA--DYMER--E-PVV---LAMIRDV-FVHTDKE------GYA--SNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAI--AGARYVEL-DASHISNIERADAFTKTVVDFLTE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XUA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155565 for 2394 contacts (-65.0/contact) +
2D Compatibility (PS) -27127 + (NN) -3861 + (LL) 5260
1D Compatibility (HY) -4400 + (ID) 2050
Total energy: -187743.0 ( -78.42 by residue)
QMean score : 0.368
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