Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVIDNNIIVLEDLTLDTAKTKEMAAILKGLSVEKKALIVTADANEAVALSARNIPGVTVVEANGINVLDVVNHEKLLITKAAVEKVEEVLA
5GAE Chain:E ((1-201))-MELVLKD----AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALED-VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA


General information:
TITO was launched using:
RESULT:

Template: 5GAE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98436 for 1403 contacts (-70.2/contact) +
2D Compatibility (PS) -22119 + (NN) -15070 + (LL) 112
1D Compatibility (HY) -14000 + (ID) 4200
Total energy: -153713.0 ( -109.56 by residue)
QMean score : 0.600

(partial model without unconserved sides chains):
PDB file : Tito_5GAE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAE-query.scw
PDB file : Tito_Scwrl_5GAE.pdb: