Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTFHPDMEIKVEDNVLTVARPSDQKEHRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYRASKSGNKLVLNVGYSHPVEIVPEEGIEIEVPSQTKVVVKGTDKERVGAIAANIRAVRSPEPYKGKGIRYEGEVVRRKEGKSAK
1RL6 Chain:A ((7-170))
-------PIEIPAGVTVTVNGNT-VTVKGPKGELTRTFHPDMTITVEGNVITVTRPSDEKHHRALHGTTRSLLANMVEGVSKGYEKALELVGVGYRASKQGKKLVLSVGYSHPVEIEPEEGLEIEVPSQTKIIVKGADKQRVGELAANIRAVRPPEPYKGKGIRYEGELVRL-------
General information:
TITO was launched using:
RESULT:
Template:
1RL6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54795 for 1183 contacts (-46.3/contact) +
2D Compatibility (PS) -18312 + (NN) -10870 + (LL) 720
1D Compatibility (HY) -18800 + (ID) 6550
Total energy: -108607.0 ( -91.81 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_1RL6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RL6-query.scw
PDB file :
Tito_Scwrl_1RL6.pdb
: