Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
4QBI Chain:B ((1-214))
MNLVLMGLPGAGKGTQAEKIVEAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLGKDDCERGFLLDGFPRTVAQAEALEEILEDIGRKIDYVIHIDVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCGGELYQRADDNEETVAKRLEVNMKQMKPLLDFYEQKGYLRNVNGEQDIEKVFADVRELLGG---
General information:
TITO was launched using:
RESULT:
Template:
4QBI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83365 for 1588 contacts (-52.5/contact) +
2D Compatibility (PS) -23657 + (NN) -16966 + (LL) 304
1D Compatibility (HY) -28800 + (ID) 8750
Total energy: -161234.0 ( -101.53 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_4QBI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QBI-query.scw
PDB file :
Tito_Scwrl_4QBI.pdb
: