Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MPLLTPTSVVLGVLLSQFLNGYEWAVPWIFAFITFAGSLSANF-------QSLRHALSHPLPMILALFVLHIFMPLFAWGSG-------------HLIFKGD-PLTITGLTLAVVIPTGITSL---IWAAM--YKGNVGLTLSIILVDTV----------LSPLIVPLSLSLLAGAQVHMDVW-GMMKGLIVMVVIPSFLGMLFNQMSSPERTAFVSSALSPFSKLC------LMAVIAINSSAIAPY-------FKSIDLRFAGIAVTVF---------FIALTGYAAAWLIGKMMKRRQEEIVSLIFTGGMRNISAGAVLAVTFFPSQVAVPVVIGMLFQQILAALFGYMLNRFELKPMLQKA----------------------------- |
| 4XGC Chain:E ((1-458)) | MEAICSSLEPLFPCREAAIETLGELIGDSSETYPSAIYLFGHSGTGKTALTRAFLKECGKRQNVRTAHLNAIECYTTKIMLEILLDSLAPDQGDALKVDNMLDFVEQLRRQAATRVEDQGFLIAVDNAERLRDMDANVLPVLLRLQELTNLNLCVILLSQLPFEKFYNKTGLSE-IVCLHLAQYNKAETQRILGSDFQQVRNQLLEQKKRLEICQEAVTEDFYNNYLNLFLSVFYKACRDVPELQLTARKCLSTYLEPVLDGTSRLWRHIAGPLRSALTQIYMRIESLELPYYAKFLLIAAFLASHNAAKQDKRLFST--TLGPKSFSIDRLLAIFYAILEEKVGLTCNLLSQISTLVHLNLLSFVSGEQNIMEGSARLQCTIGLEFVLQIGKVVGFNVRQYLCD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269894 for 1990 contacts (-135.6/contact) +
2D Compatibility (PS) -31222 + (NN) -5938 + (LL) 512
1D Compatibility (HY) -13200 + (ID) 2650
Total energy: -322392.0 ( -162.01 by residue)
QMean score : 0.140
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