Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNAVIYQPVQIEYLKKTSDLFSEQQLADSFVLIFHLKGNGYISIGTNTNPLQKKTLYVCPPNETFGFTPAADGHIDACIIRLLSYIKETGQDIFTPCTESELAKLKLMNVSHIENLAVRLQELAALWNESSQLSQLKCVIEVQSLIYDLFTASLSDQTDTHSAIEKTKHYIETHADTKITLAQLSQMAGISAKHYSESFKKWTGQSVTEFITKTRITKAKRLMAKSNCKLKEIAHQTGYQDEFYFSRIFKKYTGCSPTSYMKKRRKKIAAYGRGTMGHLIPLHHIPFAAALHPK-WTSY-YYQHYSTDIPVQLSAYRFNEKWEENLYTLSQAEPDVIVSMDSISPEEQDRLNRIAEVMYLPSEESWRTHFLQTASFLKEESEAEKWLADYDQQTTAAKKTLQHV----QGLRFLFLRLHKQNFYLAHNRSVREVFFGDLGFSSATTADT------PSEQAISLENIANYQADCMMLFLFKEPET-----IAYYQQLQQTEAWQNLSAVRDNRVYL-LSLDPWN-EYSACGHERIVQQTVSLLSGDCP |
| 3MWF Chain:A ((5-294)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTSIKHAMGT--TEIKG-KPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTK------IVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYAG-GYAGEILNDLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MWF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129550 for 2317 contacts (-55.9/contact) +
2D Compatibility (PS) -28420 + (NN) -7313 + (LL) 19720
1D Compatibility (HY) -3600 + (ID) 2650
Total energy: -151813.0 ( -65.52 by residue)
QMean score : 0.342
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