Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKTLFIFSAILTLSIFAPNETFAQTAGNLIEPKIINAETAQFSTKKLRKVDQMIERDIA-AGFPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRPAKMKTRTMFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQPGDLIKGKDKIRVIDVLQHQSGLPSSFYFYTPE--K------AGKYYSQERDKTIEYLTKIPLDYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDVYTEQELYKPLRLKHTLYNPLQKGFKPKQFAATERMGNTR-----DGV-IQFPNIRTNTLQGEVHDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTADLF-TAPSA------TDPTFALGWRRNGSKSMEWMFGPHASENAYGHTGWTGTVTIIDPAYNLGIALLTNKKHTPVIDPEENPNVFEGDQFPTGSYGSVITAIYEAME |
| 1CI9 Chain:A ((15-391)) | --------------------------------------------AASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADR-------EAGRPMREDTLFRLASVTKPIV-ALAVLRLVARGELALDAPVTRWLPEFRPRL--ADGSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAPGSGWQYSL-ALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAEP----ERFAVPYHDGQPEPVRMRDGIEVPLPEGHGAA--VRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANP-----G-FLPETLADAARRDQAGVGAETRGPGWGFGYLSAVLDDPAAA-GTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEGMSG---------------PLTIALRDAVYA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92785 for 3127 contacts (-29.7/contact) +
2D Compatibility (PS) -37564 + (NN) -15230 + (LL) 5772
1D Compatibility (HY) -14400 + (ID) 4050
Total energy: -158257.0 ( -50.61 by residue)
QMean score : 0.430
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