Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGITSVLTKDNVKKIDTDIDVQERDLNVFITSASRVIAPLWPISTFAARNPWMGLENQPFDQVASWLKNTRDVDIYPSAS-------MIRSAKNKGEID-----------EDFVEMGLQRWLDSHSYHIPRDVAERFCHAALKLDPLPSDLLSSHELEK---LVSECSGLDHIENVFMQP-----------------LSSYIENQDGE-RLVNILDHHVIKWSKLYLDDS----QAGWTMPNREEGFYRAWQHLIQYDPALSKKQRERVKGWPKEAHLA---LQEALFALEIPESEIQTYLEGH--LLSLP-GWAGMM-LWRSQQSSHEHALLTEYL-AV-----RISMEWALIKPYLP--LTNERSKKTISIAPLIAAWIHWGGLT----LEEWSQMTA-SEQNEYLSFAYSFDEKLRKKL--WLEAWEQTYTD-RLSQKIISKQRETGREKSALAQLAFCIDVRSE------PFRRQLEKEGPFETIGIAGF---------------------------FGVPIA---TCELGSKHSHASLP---IIQKPQ--NKIKEFAD-EDVFKK-----------YNQRKQAIHSLSHTFKTMKQNALSSLLLPELSGPWLTLQMAARSFVPRK-AGRFIRNLREAWLRKPDTKLSLHHDATEAEIPV-GFTDEEKVNYARQALKMMGLTENIAPLVVICGHGSQS-TNNPYSAALDCGACGGAAGGFNARVLAAL---CNLSEVREALLAEGI-----KIPEDTVFAAAEHNTTVDELHWL----YVPELS-EAAQEAFEQIEAVMPKVRHHVNAERLAQLPNFQSKLKNP------KAEANRFAEDWSEIR-PEWGLARNAAFI-IGKRELTQDCDLEGRAFLHNYDW--KQDESGELL---------ANIIVG-PGTVAQWINLQYYASTVA-PHYYGSGNKAT-QTVTAGLGVMQGNASDLLAGLPWQSV-MESDHEAYHSPLR--LLI-LI----QAPREYVERL------LN--HDSAFLQKVQNGWVRLASLDPEGCWESW--------------------------------------
2YOC Chain:A ((20-1070))---DVVVRLPDVAVPGEAVTAVENQAVIHLVDIAGITSS--SAADYSSKNLYLW-NNETCDALSAPVADWNDVSTTPSGSDKYGPYWVIPLNKESGCINVIVRDGTDKLIDSDLRVAFGDFTDRTVSVIAGNSAVYDSRADAFRAAFGVALAEAHWVDKNTLLWPGGQDKPIVRLYYSHSSKVAADGEGKFTDRYLKLTPTTVSQQVSMRFPHLSSYAAFKLPDNANVDELLQGETVAIAAAEDGILISATQ--VQTAGVLDDAYAEAAEALSYGAQLADGGVTFRVWAPTAQQVDVVVYSADKKVIGSHPMTRDSASGAWSWQGGSDLKGAFYRYAMTVYHPQSRKVEQYEVTDPYAHSLSTNSEYSQVVDLNDSALKPDGWDNLTMPHAQKTKADLAKMTIHESHIRDLSAWDQTVPAELRGKYLALTAGDSNMVQHLKTLSASGVTHVELLPVFDLATVNEFSDKVADIQQPFSRLCEVNSAVKSSEFAGYCDSGSTVEEVLNQLKQSDSQDNPQVQALNTLVAQTDSYNWGYDPFHYTVPEGSYATDPEGTTRIKEFRTMIQAIKQDLGMNVIMDVVYNHTNAA-GPTDRTSVLDKIVPWYYQRLNETTGSVESATCCSDSAPEHRMFAKLIADSLAVWTTDYKI------DGFRFDL--MGYHPKAQILSAWERIK------ALNPDIYFFGEGWDSNQSDRFEIASQINLKGTGIGTFSDRLRDSVRGGGPFDSGDALRQNQGIGSGAGVLPNELASLSDDQVRHLADLTRLGMAGNLADFVMIDKDGAAKKGSEIDYNGAPGGYAADPTEVVNYVSKHDNQTLWDMISYKASQEADLATRVRMQAVSLAT----VMLGQ---GIAFDQQGSELLRSKSFTRDSYDSGDWFNRVDYSLQDNNYNVGMPRISDDGSNYEVITRVKEMVATPGEAELKQMTAFYQELTELRKS-SPLFTLGDGSAVMKRVDFRNTGSDQQAGLLVMTVDDGMKAGASLDSRLDGLVVAINAAPESRTLNEFAGETLQLSAIQQTAGENSLANGVQIAADGTVTLPAWSVAVLELPQGEAQGAGLPVSS


General information:
TITO was launched using:
RESULT:

Template: 2YOC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4290 for 6515 contacts (0.7/contact) +
2D Compatibility (PS) -85158 + (NN) 10300 + (LL) 3140
1D Compatibility (HY) -11200 + (ID) 7300
Total energy: -85928.0 ( -13.19 by residue)
QMean score : 0.108

(partial model without unconserved sides chains):
PDB file : Tito_2YOC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YOC-query.scw
PDB file : Tito_Scwrl_2YOC.pdb: