Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFLKALPRRAEVQYDCLDRTLETQENVNLNIRVNVKEVATWGVNTCIISLKGLDNADD------RFVLPEVNTALALFPLSIAADCLLMLPCISVVMSISSVMKSVTVE-
1TKN Chain:A ((460-569))
-RVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKE
General information:
TITO was launched using:
RESULT:
Template:
1TKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48549 for 688 contacts (-70.6/contact) +
2D Compatibility (PS) -10561 + (NN) -1229 + (LL) 208
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -63581.0 ( -92.41 by residue)
QMean score : 0.323
(partial model without unconserved sides chains):
PDB file :
Tito_1TKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TKN-query.scw
PDB file :
Tito_Scwrl_1TKN.pdb
: