Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------------MKRNQKEWESVSKKGLMKPGGTSIVKAAGCM----GCWASKSIAMTRVCALPHPAMRAI
2LU7 Chain:A ((1-82))
MTRVRSTPGGDLELVVHLSGPGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQDSRIFLVSVEEP---
General information:
TITO was launched using:
RESULT:
Template:
2LU7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4435 for 240 contacts (-18.5/contact) +
2D Compatibility (PS) -5530 + (NN) -343 + (LL) 448
1D Compatibility (HY) -400 + (ID) 300
Total energy: -10560.0 ( -44.00 by residue)
QMean score : -0.134
(partial model without unconserved sides chains):
PDB file :
Tito_2LU7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LU7-query.scw
PDB file :
Tito_Scwrl_2LU7.pdb
: