Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSNGDKLSLSVQNLAN--TNEITIVQAIGELKKSGK-DAIPVLVEALKEE-GSLCNIAAAVLGEFG--------------------------------------------------------EDASEAAEELSCLLKSHAEDTRMAAAISLMRIGKP-SLPFVIKIAQ--ESEGQSCFWASWCIAWIDPSCIEPKMYKCLKYEHEHPSGIVAPFAAEEALGKLIAFQLKDKED
4D4Z Chain:A ((74-288))
-----RAIPMLVDVLQDTRQEPMVRHEAGEALGAIGDPEVLEILKQYSSDPVIEVAETCQLAVRRLEWLQQHGGEPAAGPYLSVDPAPPAEERDVGRLREALLDESRPLFERYRAMFALRNAGGEE--AALALAEGLHCGSALFRHEVGYVLGQLQHEAAVPQLAAALARCTENPMVRHECAEALGAIARP----ACLAALQAHADDPERVVRESCE-VALDMYEHE-------
General information:
TITO was launched using:
RESULT:
Template:
4D4Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109440 for 1205 contacts (-90.8/contact) +
2D Compatibility (PS) -16332 + (NN) -10638 + (LL) 628
1D Compatibility (HY) -800 + (ID) 950
Total energy: -137532.0 ( -114.13 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_4D4Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4D4Z-query.scw
PDB file :
Tito_Scwrl_4D4Z.pdb
: