Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTLWKVLKIVFVSLAALVLLVSVSVFIYHHFQLNKEAALLKGKGTVVDVDGKKMNVYQEGSGKDTFVFMSGSGIAAPAYEMKGLYSKFSKENKIAVVDRAGYGYSEVSHDDRDIDTVLEQTRKALMKSGNKPPYILMPHSISGIEAMYWAQKYPKEIKAIIAMDIGLPQQYVTYKLS-GVDRLKV----RGFHLLTSIGFHRFIPSAVYNPEVIRQSFLTDEEKEIYKAINFKQFFNADMEHELLQS---------YQN-GSKSVNLPAPKETPVLILDAVSDQNRHSKYAIQNRKDYEAFAAQFNTADI-KELRGTHSIYLYQPDQIYKLSMEFMRKVR |
3WI7 Chain:A ((19-301)) | -----------------------------------------GAKAYDVPAFGLQIHTVEHGS-GAPIVFLHGNPTSS--YLWRHIFRRLHGHGRLLAVDLIGYGQSSKPDIEYTLENQQRYVDAWFDALDLR-NVTLVLQDYGAAFGLNWASRNPDRVRAVAFFEPVLRNIDSVDLSPEFVTRRAKLRQPGEGEIFVQ-QENRFLTELFPW---FFLTPLAPEDLRQYQTPFPTPHSRKAILAGPRNLPVDGEPASTVAFLEQAVNWLNT-SDTPKLLLTFKPGFLL----TD-AI-L-KWSQVTIRNLEIEAAGAGIHFVQEEQPETIARLLDAWLTRI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WI7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62482 for 2236 contacts (-27.9/contact) +
2D Compatibility (PS) -28259 + (NN) -9377 + (LL) 5680
1D Compatibility (HY) -2400 + (ID) 2000
Total energy: -98838.0 ( -44.20 by residue)
QMean score : 0.447
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