Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRQEELTIHKALPADGDWKSLLFQPLPERDHYETAQGLSFSRLAGQILGTPIDETDYYNELYELSVN-------------DRITI---LSETLDKTIEPET-FQKLQHIHSINQKE---KGLSVSRFVAFLDGEKLIAKHSNPLMHRHLRKALMTLLHTFA--DSHEKGLNHPDFRRVLLD-VSKFSLNHLNPWLEKTDIEREMPKVVWY-----GDATKSQLYFLYYLMLVGCDVLLFHPAGTDQLALVDPKQELGFTEKLPDVSELQP-----FPKEKPDRKSTVAYRSTKEIEHVLNH------------------------EESMLYKPWQFRDHTPVSVTLKTTYDELFLITKERAFIRPNFKADKHSIEIPNVFAKIMGVSKDNKEYWNRLHTLAD-YQETEMVRSFPFTEEIKSNYQFHYSHALDQEGNIDPDKLMASNVWQYKQLPAGVQ-----TAIAKTISRMCRYPRLKALHQEQVKD----------VQIYLFKQTTNLPANLLK--LIQMFDYAQTV--PKLVLYHTEMSGGLTRSDA-AALLFLNEIGIDIIIYNPPGHQDIEQFIEEDQYDIHWLDDMVFQQD-YKEPSLVKRLFRTITQK---------------
4NFU Chain:A ((15-633))AFEALTGINGDLITRS-WSASKQAYLTERYHKEEAGAVVIFAFQPSFSEKDFFDPDNKSSFGEIKLNRVQFPCMRKIGKGDVATVNEAFLKNLEAVIDPRTSFQASVEMAVRSRKQIVFTGHSSGGATAILATVWYLEKYFIRNPNVYLEPRCVTFGAPLVGDSIFSHALGREKWSRFFVNFVTRFDIVPRITLARKASVEETLPHVLAQLDPRNSSVQESEQRITEFYTSVMRDTSTVANQAVCELTG-SAEAILETLSSFLELSPYRPAGTFVFSTEK----RLVAVNNSDAILQMLFYTCQASDEQEWSLIPFRSIRDHHSYEELVQSMGMKLFNHLDGENSIESSLNDLGVSTRGRQYVQAALEEEKKRVENQKKIIQVI----QQERFLKKLAWIEDEYKPKCQAHKNGYYDSFKVSNEENDFKANVKRAELAGVFDEVLGLLKKCQLPDEFEGDIDWIKLATRYRRLVEPLDIANYHRHLKNEDTGPYMKRGRPTRYIYAQRGYEHHILKPNGMIAEDVFWNKVNGLNLGLQLEEIQETLKNSGSECGSCFWAEV--EELKGKPYEEVEVRVKTLEGMLREWITAGEVDEKEIFLEGSTFRKWWITLPKNHKSHSPLRDYMMDEI


General information:
TITO was launched using:
RESULT:

Template: 4NFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2353 -118534 -50.38 -225.78
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -50.38
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.108

(partial model without unconserved sides chains):
PDB file : Tito_4NFU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NFU-query.scw
PDB file : Tito_Scwrl_4NFU.pdb: