Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAENQEVYDVTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGGKVSLFFPEKIIRDIGGIPGIAGKQLIEQLKEQAATFDPDIVLNQRVTGFERLDDGTIVLTGSEGKKHYTRTVILACGMGTLEVNEFDSEDAARYAGKNLH-YGVEKLDAFKGKRVVISGGGDTAVDWANELEPIAASVTVVHRREEFGGMESS-VTKMKQSSVRVLTPYRLEQLNGDEEGIKSVTVCHTESGQRKDIEIDELIINHGFKIDLGPMMEWGLEIEEGRVKADRHMRTNLPGVFVAGDAAFYESKLRLIAGGFTEGPTAVNSAKAYLDPKAENMAMYSTHHKKLVHK
4GCM Chain:A ((4-309))----EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI-PGGQMANT-EE--VENFPGFEMITGPDLSTKMFEHAKKFGAVYQYG-DIKSVEDK--GEYKVINFGNKELTAKAVIIATGA-E--YKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDK-G-LRQIVTATGDGSIAAQSAAEYIEHLN----------------


General information:
TITO was launched using:
RESULT:

Template: 4GCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1804 -189242 -104.90 -622.50
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -104.90
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.456

(partial model without unconserved sides chains):
PDB file : Tito_4GCM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GCM-query.scw
PDB file : Tito_Scwrl_4GCM.pdb: