Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MGITKEEVNSYYQKAGIVLT-------DEEV----------DQIQLMDYGL----GKERKVGLQLFV-------------YVNTDRYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPK------------------VLPPQEDREHYTVWHEIELEPGG--QYTIPPNTKHWFQA---GEEGAVVTEMSSTSTDKHDIFTDPRI----------------------------
4Q0S Chain:A ((12-260))SARTSITRREYDEWVREAAALGKALRYPITEKMVNDSAGIVFGADQYDAFKNGMWSGEPYEAMIIFESLNEPAVDGLPTGAAPYAEYSGLCDKLMIVHPGKFCPPHHHGR------KTESYEVVLGEMEVFYSPTPSAESGVELLNFSGMPVGSPWPEGVALPKGRESSYEKLTSYVRLRAGDPKFVMHRKHLHAFRCPPDSDVPLVVREVSTYSHEPTEAAAGNHAPIPSWLGMHDNDFVSDAANTGRLQTAIS


General information:
TITO was launched using:
RESULT:

Template: 4Q0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 730 -38758 -53.09 -240.73
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -53.09
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.346

(partial model without unconserved sides chains):
PDB file : Tito_4Q0S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q0S-query.scw
PDB file : Tito_Scwrl_4Q0S.pdb: