Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQGTVKWFNAEKGFGFI--------ERENGDDVFVHFSAIQSDGFKSLDEGQKVSFDVEQGARGAQAANVQKA
4ALP Chain:A ((11-78))---GHCKWFNVRMGFGFISMTSREGSPLENPVDVFVHQSKLYMEGFRSLKEGEPVEFTFKKSSKGFESLRV---


General information:
TITO was launched using:
RESULT:

Template: 4ALP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 233 -36588 -157.03 -609.79
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -157.03
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.647

(partial model without unconserved sides chains):
PDB file : Tito_4ALP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ALP-query.scw
PDB file : Tito_Scwrl_4ALP.pdb: