Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQPLVGIIMGSTSDWETMKHACDILDELNVPYEKKVVSAHRTPDFMFEYAETARERGIKVIIAGAGGAAHLPGMTAAKTTLPVIGVPVQSKALNGMDSLLSIVQMPGGVPVATTSIGKAGAVNAGLLAAQILSAFDEDLARKLDERRENTKQTVLESSDQLV
1U11 Chain:B ((22-166))--PVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWR---------------


General information:
TITO was launched using:
RESULT:

Template: 1U11.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 814 -122198 -150.12 -842.74
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.87

3D Compatibility (PKB) : -150.12
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.615

(partial model without unconserved sides chains):
PDB file : Tito_1U11.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1U11-query.scw
PDB file : Tito_Scwrl_1U11.pdb: