Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYDVTEWKHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRRFLVPCVLEVSAIEAIVPGFDLYFIPSVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYAR-VSELLQLPIFYLEYSGVLGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAEHADVIVVGNAVYEDFDRALKTVAAVKGE
3W01 Chain:B ((6-228))MYDIKKWRHIFKLDPAKHISDDDLDAICMSQTDAIMIG----VTEDNVIHLMSKIRRYPLPLVLEISNIESVMPGFDFYFVPTVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKKALKTV------


General information:
TITO was launched using:
RESULT:

Template: 3W01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1120 -168278 -150.25 -771.92
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.86

3D Compatibility (PKB) : -150.25
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.645

(partial model without unconserved sides chains):
PDB file : Tito_3W01.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3W01-query.scw
PDB file : Tito_Scwrl_3W01.pdb: