Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFWKNKNVFVTGCTGLLGSYLVKELIEQG-ANVTGLVRDHVPQSNLYQGEHIKKMNIVRGSLEDLAV-IERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRKHPLIKRVIVASSDKAYGDQENLPYDENMP-------LQGKHPYDVSKSCADLISHTYFHTYGLPVCITRCGNLYGGGDLNF-------NRIIPQTIQLVLNGEAPEIRSDGTFVRDYFYIEDAVQAYLLLAEKMEENNLAGEAFNFSNEI-QLTVLELVEK-ILKKMNSNLKPKVLN--------QGSNEIKHQYLSAEKARKLLNWTPAYTIDEGLEKTIEWYTEFFKK
2BLL Chain:A ((316-654))------MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS-RFLN--HPHFHFVEGDISIHSEWIEYHVK--KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY--RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGN-RCDGEIINIGNPENEASIEELGEMLLA-SFEKHPLRHHFPPFAGFRVV-----VEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD-


General information:
TITO was launched using:
RESULT:

Template: 2BLL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1593 -171590 -107.72 -570.07
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -107.72
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.442

(partial model without unconserved sides chains):
PDB file : Tito_2BLL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BLL-query.scw
PDB file : Tito_Scwrl_2BLL.pdb: